Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906280.1_cds_XP_016456488.1_50315
CDS Infomation

[gene=LOC107780452] [db_xref=GeneID:107780452] [protein=protein SMAX1-LIKE 6-like] [partial=5'] [protein_id=XP_016456488.1] [location=complement(join(101138..102964,103074..103317,105505..>106262))] [gbkey=CDS]
Sequence

CATTTTATACTATCGATTTTGGATGACCCGATTGTGAGTCGGGTTTTCGGGGAAGCGGGT
TTTCGGAGTTGTGATATAAAGCTCGCAATTCTGAATCCACCCGCCATTTCTAGGTTTTCC
AAGACGACTCGTTGCCCGCCTCTGTTTCTTTGTACTTTAACCGATTCGGAGCTGAACAAC
CGTGGGCTTAGCTTCCCATTTTCTGGCGTTCCCAAAACGGTGAATATTGATGAGAATTCT
AGAAGAATCGGGGAGATTCTTGTGAAGAAAGAGTGTAGAAATCCATTGTTAATCGGGATT
TGTGCAAGTGATGCACTTTGCAGCTTCACTGATTGTGTACAGAAGGGTAAAAGTGGTGTA
TTGCCTGATGAAATTAAAGGGCTGAGTGTAATTTGTGTTGAAAAAGAGATTTCAGAGTTC
ATAGGCGGAGGTGGGAGTGAAGAAATGATGAGTTTGAAGTTTAAGGAAGTAAGTGATGCT
GTGGAGTGTTGTACAGCGGCAGGGGCTGGAATTATAGTGAATTATGGGGAACTGAAGGAG
TTTGTTGATGATGATGAAGAGTCAGTGAAATATGTGGTTTCTAGGTTCACTAAAATAATG
GAAGATTATAGCGGGAAATTGTGGTTGGTTGGAGCAGCAGCAAGTTATGATATTTATATG
AAGTTTTTGGGTCGCTTCCCTACAATTCAAAAGGACTGGGATTTACATCTCCTGCCCTTT
ACTGCATCATCCACTCCAGGACTACCTTCCAAATCCAGCTTGATGGGGTCATTTATTCCG
CTTGGCGGGTTCTTTTCCACAGCATCTGAGTTTGTAAACTCGTGCAGAAACAAAAATGAA
TCTACAGCTCGATGCAAACTTTGCAATGAAAAGTATGAGCAAGAAGTTTCCACTACGCTG
AGAGGAACAACTGGTTCAGTCGCTGATGAGCATGCAACACATTTATCTTCTTGGTTACAA
AAGGCTGAATGCGGTCCAAGCAAGGGACTAGTTGGGGTAGAGGCCAATGAAGACAACAGT
TTATTAAATGCCAGACTGGTGGGATTGCAAAAGAAATGGAATGATATATGCCAGCGTCTT
CATCACATACATCCATTTCAACCAGATGCTCTTCAAGCCAGGTCACATCTTCCCAGTTTT
GGTATCTTTCAGAGTTGTGCTACTGGGGTTGAAAGCAGCAATAAAGGTTCATTGTTGGAT
GCAAGATTTACTAATCAAAGTTGTATGTTATCAGACTTGCAAAACACCTCCATGACCCAA
AAGAACATGTCAAAACCAATCGTTTCTGAAGGTGATTCTGATTCCCAAGCTGAACTACTG
GCTCAGAGTTTGGAAACACCGCAGCTGAAGAAGGAAAATATCTGGACCCCTTCCCCTCAT
GCTCCACATGATTTGAGCCTGCCCCTTGATCGTACATCATCAGCTTCAAATGCTTCCGTT
AGCACGGACCTGGGGTTGGGAACCATCTATGTATCCACTGAGAGAGAGCTGTGGAAACCC
AGCTTTCAGGAGCACCAGGATAGCCTTCATTACTTTTCTGGATCAGTTTCTTCTGCTTCT
TCTGTTCCTCGGTTAGACAATAAGTTGGATGCAAAAGACTTTAAGAACCTCTATAAAGCT
CTTTCTGAACATGTATGTTGGCAAGAGGAAGCCATTTATGCCATTAGTCAGACTGTCTCC
CATTGCAGAAGTGGAAATGGAAGGCATCATGGCTCTAGGAAAGGAAATAATATCTGGCTC
AGCTTCCTTGGTCCTGACAAAGTGGGGAAGCATAAAATTGCCAAAGCTCTTGCTGAGAAA
GTCTTTGGTTGCAGCGATAGCATGCTCTCTGTGGATCTGAGCTCTAGTGATGGGAGTAGC
TACTCAAATTCTCTCTTTAACCATCAAGATACAAGAAACAGTTACGTGAATCTTAGGGGA
AAGACAGTTGTCGACTACATTGTTGAGGAGTTAAGCAAGAAGCGTTGCTCTCTTGTGCTT
CTTGAAAACATAGAAAAGGCTGATTTTCTTGTTCAGAATAGTTTGTCTCACTCTATCAGA
ACTGGTAAATTTTTGAACTTGCACGGGAAGGAAATCAGCATCAATAACATGATTTTTGTG
ATTACCTCAAATTCGGCAAAAGTTACTAAAGATTTCTTTCTGAGTCCTGAGTTTTCAGAA
GAGAATATATTAGCAGCCAAAAACTTGCAGATGCAGATAGCAATTGGATCTGGCAATCCA
AATAGGATTAGAGTGAAGAATACGAATTTGTGGATTACTTCAGGGGACAGAACATCAGAA
TCTTTCCCTGCATATAAAAGAAAGCAGACTGACTCGAACAATGGCAAGCTGTTTCAAATG
CCGAAACGTATGTGCACCATCCCGAAATCTTCTCTTGATTTGAATTTGCCTGTGGAAGAG
ATGGAAGAAGAGAATCAACGTGATGAGTGTGACCGTGACTCTGGCTCTGAAGGTTCAAAA
GCATGGTTGGAGGAAATCTTGGAGCAAATGGACGATAATGTGGTCTTCAAGCCATTTGAT
TTTGGTGCTCTTGCTGAGAAAATTTTAAAGGAAGTCAACTTTAACCTCCAGGAGATTGTT
GGAGTGGATATCAACCTGGAGATTGACACAGAAGTAATGGCGCAGATACTTGCCGCTGCT
TGGTTATCTGACAGAAAGGAAGCTGTCAAGGATTGGGTTGACAAGGTTCTCCGCAGGAGC
TTTATGGAAGTCCGAAGCAGGTTCCAACATATTGCTGATAGTTTCATAAGGTTAGTTAAC
TGTCAAGGCATTGCTGTAGAAGACCAGGCTCCTGGAATTCACCTTCCAGCTAAAATAACT
GTAGACTGA

Peptide Sequence

PEP ID

XP_016456488.1
PEP Infomation

PREDICTED: protein SMAX1-LIKE 6-like, partial [Nicotiana tabacum]
Sequence

HFILSILDDPIVSRVFGEAGFRSCDIKLAILNPPAISRFSKTTRCPPLFLCTLTDSELNN
RGLSFPFSGVPKTVNIDENSRRIGEILVKKECRNPLLIGICASDALCSFTDCVQKGKSGV
LPDEIKGLSVICVEKEISEFIGGGGSEEMMSLKFKEVSDAVECCTAAGAGIIVNYGELKE
FVDDDEESVKYVVSRFTKIMEDYSGKLWLVGAAASYDIYMKFLGRFPTIQKDWDLHLLPF
TASSTPGLPSKSSLMGSFIPLGGFFSTASEFVNSCRNKNESTARCKLCNEKYEQEVSTTL
RGTTGSVADEHATHLSSWLQKAECGPSKGLVGVEANEDNSLLNARLVGLQKKWNDICQRL
HHIHPFQPDALQARSHLPSFGIFQSCATGVESSNKGSLLDARFTNQSCMLSDLQNTSMTQ
KNMSKPIVSEGDSDSQAELLAQSLETPQLKKENIWTPSPHAPHDLSLPLDRTSSASNASV
STDLGLGTIYVSTERELWKPSFQEHQDSLHYFSGSVSSASSVPRLDNKLDAKDFKNLYKA
LSEHVCWQEEAIYAISQTVSHCRSGNGRHHGSRKGNNIWLSFLGPDKVGKHKIAKALAEK
VFGCSDSMLSVDLSSSDGSSYSNSLFNHQDTRNSYVNLRGKTVVDYIVEELSKKRCSLVL
LENIEKADFLVQNSLSHSIRTGKFLNLHGKEISINNMIFVITSNSAKVTKDFFLSPEFSE
ENILAAKNLQMQIAIGSGNPNRIRVKNTNLWITSGDRTSESFPAYKRKQTDSNNGKLFQM
PKRMCTIPKSSLDLNLPVEEMEEENQRDECDRDSGSEGSKAWLEEILEQMDDNVVFKPFD
FGALAEKILKEVNFNLQEIVGVDINLEIDTEVMAQILAAAWLSDRKEAVKDWVDKVLRRS
FMEVRSRFQHIADSFIRLVNCQGIAVEDQAPGIHLPAKITVD

Transcript Sequence

Gene sequence data has not been registered.